Gene Conservation Laboratory

SNP Workshops

2005 SNP Workshop

Developing Cooperative Databases for Pacific Salmon
Hosted By: American Fisheries Society, Genetics Section
Anchorage Hilton Hotel
Anchorage, Alaska
April 28-29, 2005

Workshop Abstracts

• Single Nucleotide Polymorphisms (SNPs) Provide Standard DNA Data for Bering/Aleutian Salmon International Survey (BASIS) Studies (Seeb et al.) (External PDF)
• DNA Standardization for Pacific Salmon Commission Studies: SNP Variation Contrasting Geographic Scales (Seeb et al.) (PDF 76K) (PDF 76 kB)
• Single nucleotide polymorphism discovery in Pacific salmon (Smith et al.) (PDF 58 kB)
• Mitochondrial DNA single nucleotide polymorphisms detected in the Pacific Rim populations of chum salmon (Abe et al.) (PDF 72 kB)
• DNA microarray for rapid detection of mitochondrial DNA SNPs in chum salmon (Moriya et al.) (PDF 14 kB)
• Washington Department of Fish and Wildlife (WDFW) Lab Overview (Young) (PDF 47 kB)
• SNPs resolve populations of Chinook salmon in the Yukon River (Templin et al.) (PDF 62 kB)
• Sockeye salmon MSA is enhanced by SNPs at both selective and neutral loci (Habicht et al.) (PDF 63 kB)

Papers related to the SNP workshop

• The evolution of molecular markers - just a matter of fashion? (Schlotterer 2004) (PDF 165 kB)
• On the trail of SNPs (PDF 217 kB)
• SNPSTRs: Empirically derived, rapidly typed, autosomal haplotypes for inference of population history and mutational processes (Mountain et al. 2002) (PDF 186 kB)
• A review on SNP and other types of molecular markers and their use in animal genetics (Vignal et al. 2002) (PDF 467 kB)
• A genotyping system capable of simultaneously analyzing >1000 single nucleotide polymorphisms in a haploid genome (Wang et al. 2005) (PDF 404 kB)
• Genetic population structure of chum salmon in the Pacific Rim inferred from mitochondrial DNA sequence variation (Sato et al. 2003) (PDF 132 kB)
• The utility of single nucleotide polymorphisms in inferences of population history (Brumfield et al. 2003) (PDF 786 kB)
• SNPs in ecology, evolution and conservation (Morin et al. 2004) (PDF 391 kB)

ADF&G Papers

• Single Nucleotide Polymorphisms provide rapid and accurate estimates of the proportions of U.S. and Canadian Chinook salmon caught in Yukon River fisheries. (Smith et al. 2005) (PDF 87 kB)
• A rapid, high-throughput technique for detecting tanner crabs Chionoecetes bairdi illegally taken in Alaska's snow crab fishery (Smith et al. 2005) (PDF 34 kB)
• Characterization of 13 single nucleotide polymorphism markers for chum salmon (Smith et al. 2005) (PDF 79 kB)
• Characterization of 12 single nucleotide polymorphism in weathervane scallop (Elfstrom et al. 2005) (PDF 66 kB)
• Use of the 5'-nuclease reaction for single nucleotide polymorphism genotyping in Chinook salmon (Smith et al. 2004) (PDF 118 kB)